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Impact of microplastic-antibiotic co-pollution on soil bacteriophages
Received:March 12, 2025  
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KeyWord:microplastics pollution;antibiotic pollution;bacteriophage;carbohydrate-active enzymes;antibiotic resistance genes
Author NameAffiliationE-mail
LIU Shuo College of Animal Science, South China Agricultural University, Guangzhou 510642, China  
LI Haiyang Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou 510642, China  
LI Yangkai Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou 510642, China  
TANG Zixuan Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou 510642, China  
NIU Shihua Wens Foodstuffs Group Co., Ltd., Yunfu 527300, China  
LIAO Xindi College of Animal Science, South China Agricultural University, Guangzhou 510642, China
Wens Foodstuffs Group Co., Ltd., Yunfu 527300, China
Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, and Key Laboratory of Chicken Genetics, Breeding and Reproduction, Ministry Agriculture, Guangzhou 510642, China
Guangdong Key Laboratory of Livestock and Poultry Breeding, Guangzhou 510642, China 
 
XING Sicheng Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou 510642, China
Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, and Key Laboratory of Chicken Genetics, Breeding and Reproduction, Ministry Agriculture, Guangzhou 510642, China
Guangdong Key Laboratory of Livestock and Poultry Breeding, Guangzhou 510642, China 
scxing@scau.edu.cn 
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Abstract:
      To investigate the impact of combined microplastic and manure-derived antibiotic pollution on soil phages, this study conducted soil incubation experiments, integrated with metagenomic sequencing and virome analysis, to systematically explore the composition, functional characteristics of soil phage communities, and their influence on ARGs dissemination under combined pollution conditions. The results demonstrated that while combined antibiotic-MP pollution did not significantly alter the compositional structure of soil phage communities, it led to a notable downregulation of phage functional gene expression. Key genes encoding functional enzymes such as glycoside hydrolases exhibited a 17%-20% reduction in expression compared to the uncontaminated control group. Simultaneously, combined pollution significantly promoted the enrichment and horizontal transfer of various ARGs, with the enrichment levels of some ARGs reaching 215.33% of those in the control group. Notably, in the soil carbon cycle, combined pollution further exacerbated phage-mediated ARGs transmission risks. Linear regression analysis revealed that phage dysfunction induced by combined pollution directly affected soil physicochemical properties, manifesting as a significant decrease in soil organic carbon content. The study indicates that combined pollution from microplastics and manure-derived antibiotics significantly impairs soil phage functionality, and increases the transmission risk of antibiotic resistance genes.